All Formula Atlantic blocks I've seen have had the lugs machined off the back of the block (gearbox end) as they won't fit in to the single seaters they are meant to be mounted to if they have that all on it.
Like this
In fact all the Formula Atlantic engines I've seen fitted to AE86s etc in the past are the entire engine (ie all the front cover stuff, internals, fancy cam cover, etc etc) but using a non-original FA block as the FA block can't be fitted to an 86 anymore due to the mounts etc machined off.